Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | 8 | 1975 | NP_065948.1 |
NR_073074.1 | 8 | 1842 | ||
XM_011509816.2 | 8 | 2493 | XP_011508118.1 | |
XM_011509817.2 | 7 | 1813 | XP_011508119.1 | |
XM_011509818.2 | 7 | 1205 | XP_011508120.1 | |
XM_017001918.1 | 7 | 1187 | XP_016857407.1 | |
AB040968.2 | 8 | 1624 | BAA96059.2 | |
AF488550.1 | 8 | 1819 | AAO49470.1 | |
AK055840.1 | 7 | 2030 | ||
AK299333.1 | 8 | 1815 | ||
BC000066.1 | 7 | 1203 | AAH00066.1 | |
BC028024.1 | 5 | 840 | AAH28024.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3032 | Chr.1:155285619 - 155318185 on Build GRCh38 | Insertion | LOC105371451 HCN3 PKLR FDPS |
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | ASH1L LOC105371451 POU5F1P4 CLK2 HCN3 RUSC1-AS1 PKLR MIR555 FAM189B SCAMP3 FDPS RUSC1 |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | RIT1 PKLR MSTO1 MSTO2P YY1AP1 FDPS GON4L SCARNA26A RXFP4 LOC100505728 HCN3 KIAA0907 SNORA80E SCAMP3 SCARNA26B ASH1L RUSC1-AS1 DAP3 ARHGEF2 RUSC1 LOC105371451 POU5F1P4 CLK2 MIR555 FAM189B SCARNA4 ASH1L-AS1 SYT11 |
nsv952214 | Chr.1:155279610 - 155304509 on Build GRCh38 | Deletion | HCN3 PKLR |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | CLK2 HCN3 PKLR SCAMP3 |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | CLK2 HCN3 PKLR SCAMP3 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | ASH1L THBS3 TRIM46 RUSC1-AS1 PKLR MUC1 FDPS MTX1 KRTCAP2 RUSC1 MIR92B LOC105371451 EFNA1 CLK2 SLC50A1 HCN3 DPM3 FAM189B SCAMP3 GBAP1 GBA |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |