Assay Details
Target Gene Details
Entrez Gene ID: | 152330 |
Gene Name: | contactin 4 |
Gene Aliases: |
AXCAM, BIG-2 |
Location: |
Chr.3:2098771-3059080 on Build GRCh38 |
Assay Gene Location: | Within Exon 33 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNTN4 | NM_001206955.1 | 24 | 3422 | NP_001193884.1 |
NM_001206956.1 | 16 | 2141 | NP_001193885.1 | |
NM_175607.2 | 25 | 3377 | NP_783200.1 | |
NM_175613.2 | 16 | 2144 | NP_783302.1 | |
XM_006713004.3 | 24 | 3387 | XP_006713067.1 | |
XM_011533425.2 | 24 | 3390 | XP_011531727.1 | |
XM_011533426.2 | 25 | 3609 | XP_011531728.1 | |
XM_011533427.2 | 25 | 3590 | XP_011531729.1 | |
XM_011533428.2 | 23 | 3579 | XP_011531730.1 | |
XM_011533429.2 | 23 | 3514 | XP_011531731.1 | |
XM_011533430.2 | 23 | 3475 | XP_011531732.1 | |
XM_011533431.2 | 22 | 6224 | XP_011531733.1 | |
XM_017005782.1 | 25 | 3332 | XP_016861271.1 | |
XM_017005783.1 | 26 | 4206 | XP_016861272.1 | |
XM_017005784.1 | 24 | 3667 | XP_016861273.1 | |
XM_017005785.1 | 25 | 3314 | XP_016861274.1 | |
XM_017005786.1 | 23 | 3576 | XP_016861275.1 | |
XM_017005787.1 | 23 | 3472 | XP_016861276.1 | |
AF464063.1 | 6 | 1288 | AAN86141.1 | |
AF549455.1 | 22 | 3420 | AAP05786.1 | |
AK057278.1 | 16 | 2122 | ||
AK097633.1 | 19 | 2668 | ||
AK314396.1 | ||||
AY090737.1 | 24 | 3259 | AAM00025.1 | |
BC026119.1 | 16 | 2124 | AAH26119.1 |
Target Gene Details
Entrez Gene ID: | 100873975 |
Gene Name: | CNTN4 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.3:3039661-3061145 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNTN4-AS1 | NR_046554.1 | |||
BM920658.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv589371 | Chr.3:2170634 - 3594980 on Build GRCh38 | Loss | CRBN CNTN4-AS1 LOC100130207 CNTN4 IL5RA TRNT1 |
esv2751994 | Chr.3:2200757 - 3178886 on Build GRCh38 | Gain | CRBN CNTN4-AS1 CNTN4 IL5RA TRNT1 |
esv2422274 | Chr.3:2100396 - 3314907 on Build GRCh38 | Duplication | CRBN CNTN4-AS1 LOC100130207 CNTN4 IL5RA CNTN4-AS2 TRNT1 |
nsv1011872 | Chr.3:2782874 - 3057776 on Build GRCh38 | Gain | CNTN4-AS1 CNTN4 |
nsv521796 | Chr.3:3038825 - 3151219 on Build GRCh38 | Loss | CRBN CNTN4-AS1 CNTN4 IL5RA TRNT1 |
dgv4636n100 | Chr.3:2825734 - 3271845 on Build GRCh38 | Gain | CRBN CNTN4-AS1 LOC100130207 CNTN4 IL5RA TRNT1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |