Assay Details
Target Gene Details
Entrez Gene ID: | 79959 |
Gene Name: | centrosomal protein 76 |
Gene Aliases: |
C18orf9, HsT1705 |
Location: |
Chr.18:12661733-12702777 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 9 - Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CEP76 | NM_001271989.1 | NP_001258918.1 | ||
NM_024899.3 | NP_079175.2 | |||
NR_073537.1 | ||||
XM_005258149.4 | XP_005258206.1 | |||
XM_017025981.1 | XP_016881470.1 | |||
XM_017025982.1 | XP_016881471.1 | |||
XM_017025983.1 | XP_016881472.1 | |||
XM_017025984.1 | XP_016881473.1 | |||
XM_017025985.1 | XP_016881474.1 | |||
XM_017025986.1 | XP_016881475.1 | |||
XM_017025987.1 | XP_016881476.1 | |||
AK022604.1 | BAB14123.1 | |||
AK301964.1 | ||||
AK303117.1 | ||||
AL833727.1 | 9 | 1322 | CAH56252.1 | |
BC026307.1 | AAH26307.1 |
Target Gene Details
Entrez Gene ID: | 56984 |
Gene Name: | proteasome assembly chaperone 2 |
Gene Aliases: |
CLAST3, HCCA3, HsT1707, MDS003, PAC2, TNFSF5IP1 |
Location: |
Chr.18:12658739-12725740 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PSMG2 | NM_147163.1 | NP_671692.1 | ||
AF068295.1 | AAF65184.1 | |||
AF161378.1 | AAF28938.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1063125 | Chr.18:12046893 - 12918252 on Build GRCh38 | Loss | CIDEA LOC100996333 SPIRE1 C18orf61 CEP76 AFG3L2 PRELID3A PTPN2 ANKRD62 LOC100996324 TUBB6 LOC105371998 PSMG2 |
nsv523743 | Chr.18:12474506 - 12742810 on Build GRCh38 | Loss | LOC100996324 SPIRE1 PSMG2 CEP76 |
More Information
Additional Information:
For this assay, SNP(s) [rs79772614] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |