Assay Details
Target Gene Details
Entrez Gene ID: | 124565 |
Gene Name: | solute carrier family 38 member 10 |
Gene Aliases: |
PP1744 |
Location: |
Chr.17:81244811-81295433 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC38A10 | NM_001037984.2 | 16 | 4151 | NP_001033073.1 |
XM_005257019.1 | 17 | 4269 | XP_005257076.1 | |
XM_011524288.1 | 17 | 4290 | XP_011522590.1 | |
XM_011524289.1 | 16 | 4266 | XP_011522591.1 | |
XM_011524290.1 | 15 | 3545 | XP_011522592.1 | |
AF086389.1 | 1 | 253 | ||
AI476273.1 | 1 | 196 | ||
BM129331.1 | 1 | 375 | ||
CA447446.1 | 1 | 390 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv26223 | Chr.17:80659041 - 81736487 on Build GRCh38 | Gain+Loss | C17orf89 LOC100130370 MIR3186 ACTG1 LOC105371921 LOC107985021 BAIAP2 HGS SLC38A10 LOC105371925 TEPSIN BAHCC1 NPLOC4 MIR657 FSCN2 RPTOR MIR4740 CEP131 MRPL12 MIR338 LOC101928855 AATK MIR1250 PDE6G OXLD1 CCDC137 LOC107985022 FAAP100 SLC25A10 LOC400627 AATK-AS1 CHMP6 BAIAP2-AS1 MIR6786 TSPAN10 ARL16 LOC100129503 MIR3065 TMEM105 LINC00482 |
nsv2161 | Chr.17:81238081 - 81282084 on Build GRCh38 | Insertion | TEPSIN C17orf89 SLC38A10 |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | C17orf89 SECTM1 MIR6787 LOC100130370 SIRT7 ACTG1 TEX19 DUS1L CCDC57 HEXDC MCRIP1 NOTUM GCGR FSCN2 UTS2R MIR4740 CEP131 AATK GPS1 PDE6G OXLD1 OGFOD3 ALYREF LOC101929511 LOC105376790 STRA13 C17orf62 CSNK1D MYADML2 FN3K ARL16 ASPSCR1 TMEM105 SLC16A3 MIR4525 TBCD MAFG-AS1 P4HB CD7 MIR3186 HGS SLC38A10 LOC105371944 LOC105371925 MAFG TEPSIN BAHCC1 NPLOC4 FOXK2 ARHGDIA B3GNTL1 PCYT2 MRPL12 LOC105376791 NPB CCDC137 FAAP100 SLC25A10 ZNF750 RAB40B AATK-AS1 RAC3 PPP1R27 LRRC45 SNORD134 DCXR NARF WDR45B MIR6786 LOC101929552 TSPAN10 FASN PYCR1 FN3KRP ANAPC11 LINC00482 RFNG |
esv3893051 | Chr.17:81244320 - 81272804 on Build GRCh38 | Gain | SLC38A10 |
dgv46n68 | Chr.17:81133921 - 81288932 on Build GRCh38 | Loss | TEPSIN AATK C17orf89 SLC38A10 CEP131 LOC105371925 AATK-AS1 |
nsv457971 | Chr.17:81216762 - 81282974 on Build GRCh38 | Loss | TEPSIN C17orf89 SLC38A10 CEP131 LOC105371925 |
nsv470619 | Chr.17:81032233 - 81349843 on Build GRCh38 | Loss | AATK C17orf89 MIR1250 BAIAP2 SLC38A10 LOC105371925 AATK-AS1 TEPSIN BAIAP2-AS1 MIR657 CEP131 MIR338 MIR3065 TMEM105 LINC00482 |
nsv1064123 | Chr.17:81168449 - 81282457 on Build GRCh38 | Gain | TEPSIN C17orf89 SLC38A10 CEP131 LOC105371925 AATK-AS1 |
nsv952389 | Chr.17:81137501 - 81593774 on Build GRCh38 | Deletion | AATK C17orf89 LOC100130370 MIR3186 ACTG1 SLC38A10 FAAP100 LOC105371925 AATK-AS1 TEPSIN BAHCC1 NPLOC4 FSCN2 MIR4740 CEP131 TMEM105 LINC00482 |
nsv1160499 | Chr.17:81235307 - 81320655 on Build GRCh38 | Deletion | TEPSIN C17orf89 SLC38A10 TMEM105 LINC00482 |
nsv509677 | Chr.17:81227139 - 81267309 on Build GRCh38 | Insertion | TEPSIN C17orf89 SLC38A10 LOC105371925 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |