Assay Details
Target Gene Details
Entrez Gene ID: | 6512 |
Gene Name: | solute carrier family 1 member 7 |
Gene Aliases: |
AAAT, EAAT5 |
Location: |
Chr.1:53087179-53142632 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC1A7 | NM_001287595.1 | 8 | 1424 | NP_001274524.1 |
NM_001287597.1 | NP_001274526.1 | |||
NM_006671.5 | NP_006662.3 | |||
NR_109858.1 | ||||
XM_011542002.2 | 3 | 927 | XP_011540304.1 | |
AB593059.1 | ||||
AB593060.1 | ||||
AB593061.1 | ||||
AK093921.1 | 1 | 209 | ||
BC012119.1 | AAH12119.1 | |||
BC017242.2 | AAH17242.1 | |||
CD672672.1 | ||||
JF917096.1 | 8 | 1241 | ||
JX162773.1 | ||||
U76362.1 | AAB53971.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1003159 | Chr.1:53079580 - 53117512 on Build GRCh38 | Gain | PODN SLC1A7 |
nsv1010121 | Chr.1:52939995 - 53134678 on Build GRCh38 | Gain | PODN MIR1273G SCP2 SLC1A7 |
nsv546240 | Chr.1:53084515 - 53134406 on Build GRCh38 | Loss | PODN SLC1A7 |
nsv950739 | Chr.1:53061429 - 53136228 on Build GRCh38 | Deletion | PODN SLC1A7 |
nsv522862 | Chr.1:53038739 - 53102049 on Build GRCh38 | Loss | PODN SCP2 SLC1A7 |
nsv516780 | Chr.1:53054454 - 53102049 on Build GRCh38 | Gain+Loss | PODN SLC1A7 |
nsv1001535 | Chr.1:52620368 - 53346539 on Build GRCh38 | Gain | C1orf123 MIR5095 CPT2 PODN MIR1273G ECHDC2 LOC100507564 ZYG11B SCP2 SLC1A7 LRP8 MAGOH LOC105378732 COA7 MIR1273F FAM159A ZYG11A |
More Information
Additional Information:
For this assay, SNP(s) [rs78040334] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |