Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 2 - Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC009741.2 | AAH09741.2 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | MIR3689D2 MIR3689F SNORD36A MRPS2 DBH-AS1 SNORD24 SARDH LOC105376306 C9orf116 FCN2 SURF2 LINC00094 FAM163B MIR3689E SNORD36B MIR3689C LOC101928193 CEL COL5A1-AS1 FCN1 MED22 MIR3689D1 MIR548AW PPP1R26 BRD3 WDR5 TSC1 LOC101928525 SPACA9 RPL7A STKLD1 LOC100996574 OLFM1 VAV2 ADAMTS13 CACFD1 ADAMTSL2 CELP RXRA GTF3C5 RALGDS LOC401557 MIR6877 SURF1 MIR3689A SURF4 COL5A1 MIR4669 OBP2B GFI1B SURF6 C9orf62 GBGT1 LOC100130548 LCN1 AK8 DBH LOC101448202 TMEM8C RNU6ATAC REXO4 SLC2A6 MIR3689B SNORD36C SNORD141A PPP1R26-AS1 ABO |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | LOC105376306 LOC100996574 GTF3C5 CEL MIR6877 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | LOC105376306 CELP GFI1B LOC100996574 GTF3C5 CEL GBGT1 RALGDS MIR6877 SNORD141A |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | LOC105376306 LOC100996574 GTF3C5 CEL MIR6877 SNORD141A |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |