Assay Details
Target Gene Details
Entrez Gene ID: | 3265 |
Gene Name: | HRas proto-oncogene, GTPase |
Gene Aliases: |
C-BAS/HAS, C-H-RAS, C-HA-RAS1, CTLO, H-RASIDX, HAMSV, HRAS1, RASH1, p21ras |
Location: |
Chr.11:532242-535567 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HRAS | NM_001130442.2 | 4 | 572 | NP_001123914.1 |
NM_001318054.1 | 4 | 572 | NP_001304983.1 | |
NM_005343.3 | 4 | 572 | NP_005334.1 | |
NM_176795.4 | 4 | 572 | NP_789765.1 | |
AB451336.1 | 3 | 367 | ||
AB451485.1 | 3 | 367 | ||
AF493916.1 | 3 | 367 | AAM12630.1 | |
AJ437024.1 | 3 | 367 | CAD24594.1 | |
BC006499.2 | 4 | 543 | AAH06499.1 | |
BC095471.1 | 3 | 368 | AAH95471.1 | |
BM801600.1 | 4 | 495 | ||
BM801632.1 | 4 | 555 | ||
BQ674260.1 | 3 | 430 | ||
BT019421.1 | 3 | 367 | AAV38228.1 | |
CR536579.1 | 3 | 367 | CAG38816.1 | |
CR542271.1 | 3 | 367 | CAG47067.1 | |
KJ534867.1 | 3 | 367 | ||
KJ534868.1 | 3 | 367 |
Target Gene Details
Entrez Gene ID: | 115399 |
Gene Name: | leucine rich repeat containing 56 |
Gene Aliases: |
- |
Location: |
Chr.11:518967-554916 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LRRC56 | XM_011519875.2 | XP_011518177.1 | ||
XM_011519877.2 | XP_011518179.1 | |||
XM_017017167.1 | XP_016872656.1 | |||
XM_017017168.1 | XP_016872657.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv467634 | Chr.11:511805 - 619789 on Build GRCh38 | Loss | PHRF1 LOC101059906 LRRC56 MIR210HG MIR210 RASSF7 IRF7 LMNTD2 HRAS LOC143666 CDHR5 |
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | PGGHG IFITM5 ANO9 RNH1 B4GALNT4 IFITM3 MIR210 PKP3 CDHR5 PHRF1 SIGIRR LOC101059906 LRRC56 MIR210HG IFITM2 PTDSS2 RASSF7 IRF7 LMNTD2 HRAS LOC143666 IFITM1 |
nsv951270 | Chr.11:528401 - 628100 on Build GRCh38 | Deletion | PHRF1 LOC101059906 LRRC56 MIR210HG MIR210 RASSF7 IRF7 SCT LMNTD2 HRAS LOC143666 CDHR5 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | CHID1 PNPLA2 RNH1 AP2A2 MIR6744 B4GALNT4 PKP3 SIGIRR LOC101059906 LRRC56 PANO1 CD151 IRF7 SCT LMNTD2 TOLLIP MUC2 CRACR2B SNORA52 SLC25A22 ANO9 POLR2L MUC5AC MUC5B TMEM80 MIR210 DEAF1 TSPAN4 MUC6 CDHR5 PHRF1 LOC101927503 LOC171391 TALDO1 EPS8L2 MIR210HG RPLP2 PTDSS2 RASSF7 HRAS DRD4 PDDC1 PIDD1 CEND1 LOC143666 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | CHID1 PNPLA2 RNH1 AP2A2 MIR6744 SIGIRR LOC101059906 LRRC56 PANO1 CD151 IRF7 TOLLIP-AS1 SCT LMNTD2 TOLLIP MUC2 CRACR2B SNORA52 SLC25A22 ANO9 POLR2L MUC5AC MUC5B TMEM80 MIR210 DEAF1 TSPAN4 MUC6 CDHR5 PHRF1 LOC101927503 LOC171391 TALDO1 EPS8L2 MIR210HG RPLP2 PTDSS2 RASSF7 HRAS DRD4 PDDC1 PIDD1 CEND1 LOC143666 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | RNH1 MIR210 DEAF1 CDHR5 PHRF1 LOC101059906 LRRC56 MIR210HG PTDSS2 RASSF7 IRF7 SCT LMNTD2 HRAS DRD4 LOC143666 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | CHID1 PNPLA2 RNH1 AP2A2 B4GALNT4 PKP3 SIGIRR LOC101059906 LRRC56 PANO1 CD151 IRF7 SCT LMNTD2 CRACR2B SNORA52 SLC25A22 ANO9 POLR2L TMEM80 MIR210 DEAF1 TSPAN4 CDHR5 PHRF1 LOC171391 TALDO1 EPS8L2 MIR210HG RPLP2 PTDSS2 RASSF7 HRAS DRD4 PDDC1 PIDD1 CEND1 LOC143666 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | CHID1 PNPLA2 RNH1 LOC101059906 LRRC56 PANO1 CD151 IRF7 SCT LMNTD2 CRACR2B SNORA52 SLC25A22 POLR2L TMEM80 MIR210 DEAF1 TSPAN4 CDHR5 PHRF1 LOC171391 TALDO1 EPS8L2 MIR210HG RPLP2 PTDSS2 RASSF7 HRAS DRD4 PDDC1 PIDD1 CEND1 LOC143666 |
nsv552855 | Chr.11:532923 - 545087 on Build GRCh38 | Loss | LRRC56 HRAS |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |