Product Details

Assay Reference Genome
Location

Chr.2:213291507 on build GRCh38
Cytoband
2q34
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

For this assay, SNP(s) [rs115093595] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Target Gene Details

Entrez Gene ID
79582
Gene Symbol
SPAG16
Gene Name
sperm associated antigen 16
Gene Aliases
PF20, WDR29
Location
Chr.2:213284369-214410501 on build GRCh38
Assay Gene Location
Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
SPAG16 NM_001025436.2 NP_001020607.1
NM_024532.4 NP_078808.3
NR_047659.1
NR_047660.1
XM_006712746.2 XP_006712809.1
XM_011511814.1 XP_011510116.1
XM_011511815.1 XP_011510117.1
XM_011511816.2 XP_011510118.1
XM_011511817.1 XP_011510119.1
XM_011511818.1 XP_011510120.1
XM_011511820.1 XP_011510122.1
XM_011511821.2 XP_011510123.1
XM_011511822.1 XP_011510124.1
XM_011511824.1 XP_011510126.1
XM_011511827.1 XP_011510129.1
XM_011511828.1 XP_011510130.1
XM_011511829.1 XP_011510131.1
XM_011511831.1 XP_011510133.1
XM_011511832.1 XP_011510134.1
XM_011511835.2 XP_011510137.1
XM_011511837.2 XP_011510139.1
XM_017004896.1 XP_016860385.1
XM_017004899.1 XP_016860388.1
XM_017004900.1 XP_016860389.1
XM_017004901.1 XP_016860390.1
AF310672.1 AAM63956.1
AF426740.1 AAN63530.1
AF490390.1 AAM97147.1
AK026377.1 BAB15466.1
AK095036.1 BAC04481.1
AK302351.1
AK310883.1
AL832962.1 CAH56274.1
BC009614.1 AAH09614.1
BC025379.1 AAH25379.1
BC067756.1 AAH67756.1
BC100282.1 AAI00283.1
CR457359.1 CAG33640.1
CR749477.1 CAH18307.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv3152 Chr2:213282926 - 213332692 on Build GRCh38 Insertion SPAG16 LOC100130451
nsv1013206 Chr2:213267855 - 213302172 on Build GRCh38 Loss SPAG16 LOC100130451
nsv834531 Chr2:213250900 - 213437519 on Build GRCh38 Loss SPAG16 LOC100130451

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