Product Details

Assay Reference Genome
Location

Chr.5:58972782 on build GRCh38
Cytoband
5q11.2
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

For this assay, SNP(s) [rs77207456] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Target Gene Details

Entrez Gene ID
5144
Gene Symbol
PDE4D
Gene Name
phosphodiesterase 4D
Gene Aliases
ACRDYS2, DPDE3, HSPDE4D, PDE43, PDE4DN2, STRK1
Location
Chr.5:58969038-60488098 on build GRCh38
Assay Gene Location
Within Exon 34
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
PDE4D NM_001104631.1 15 4484 NP_001098101.1
NM_001165899.1 17 4375 NP_001159371.1
NM_001197218.1 15 4223 NP_001184147.1
NM_001197219.1 15 4001 NP_001184148.1
NM_001197220.1 15 4639 NP_001184149.1
NM_001197221.1 11 3959 NP_001184150.1
NM_001197222.1 10 4045 NP_001184151.1
NM_001197223.1 10 3835 NP_001184152.1
NM_006203.4 15 4027 NP_006194.2
XM_005248537.3 15 5181 XP_005248594.1
XM_005248538.4 16 7082 XP_005248595.1
XM_011543469.1 18 4464 XP_011541771.1
XM_011543470.2 18 4388 XP_011541772.1
XM_011543471.1 17 4341 XP_011541773.1
XM_011543473.1 17 4289 XP_011541775.1
XM_011543477.2 17 4291 XP_011541779.1
XM_017009565.1 18 4501 XP_016865054.1
XM_017009566.1 18 4391 XP_016865055.1
XM_017009567.1 16 4129 XP_016865056.1
XM_017009568.1 18 4375 XP_016865057.1
XM_017009569.1 17 4254 XP_016865058.1
XM_017009570.1 14 5074 XP_016865059.1
XM_017009571.1 17 4297 XP_016865060.1
AF536980.1 1 1882
U02882.1 14 3805 AAC13745.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv830312 Chr5:58895752 - 59086399 on Build GRCh38 Gain PDE4D

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