Product Details

Assay Reference Genome
Location

Chr.12:23532731 on build GRCh38

Cytoband

12p12.1

Species

Homo sapiens

Variation Type

Copy Number

Additional Information

For this assay, SNP(s) [rs74615658] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Target Gene Details

Entrez Gene ID

6660

Gene Symbol

SOX5

Gene Name

SRY-box 5

Gene Aliases

L-SOX5, L-SOX5B, L-SOX5F, LAMSHF

Location

Chr.12:23529499-24562701 on build GRCh38

Assay Gene Location

Within Exon 26

Gene Symbol	Transcript Accession	Exon Location	Assay Location	Protein ID
SOX5	NM_001261414.1	17	3866	NP_001248343.1
	NM_001261415.1	15	3906	NP_001248344.1
	NM_006940.4	15	3882	NP_008871.3
	NM_152989.3	18	4115	NP_694534.1
	NM_178010.2	7	2682	NP_821078.1
	XM_011520831.2	15	3744	XP_011519133.1
	XM_011520832.2	15	3856	XP_011519134.1
	XM_011520833.2	15	4185	XP_011519135.1
	XM_011520834.2	19	4318	XP_011519136.1
	XM_011520835.2	18	4370	XP_011519137.1
	XM_011520837.2	15	3927	XP_011519139.1
	XM_011520838.2	15	3747	XP_011519140.1
	XM_011520842.2	8	2807	XP_011519144.1
	XM_017019888.1	16	4199	XP_016875377.1
	XM_017019889.1	16	4195	XP_016875378.1
	XM_017019890.1	19	4334	XP_016875379.1
	XM_017019891.1	19	4192	XP_016875380.1
	XM_017019892.1	20	4413	XP_016875381.1
	XM_017019893.1	17	4273	XP_016875382.1
	XM_017019894.1	15	6203	XP_016875383.1
	XM_017019895.1	15	3770	XP_016875384.1
	XM_017019896.1	19	4331	XP_016875385.1
	XM_017019897.1	19	4229	XP_016875386.1
	XM_017019898.1	19	4226	XP_016875387.1
	XM_017019899.1	18	3938	XP_016875388.1
	XM_017019900.1	15	4552	XP_016875389.1
	XM_017019901.1	15	9008	XP_016875390.1
	AB081588.1	18	4113	BAC16233.1
	AB081589.1	15	3882	BAC16234.1
	AK096569.1	14	2677
	BU675886.1	1	452

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