Product Details

Assay Reference Genome Location: Chr.3:54941024 on build GRCh38
Cytoband: 3p14.3
Species: Homo sapiens
Variation Type: Copy Number

Additional Information

For this assay, SNP(s) [rs138350065,rs150807556] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Target Gene Details

Entrez Gene ID: 55799
Gene Symbol: CACNA2D3
Gene Name: calcium voltage-gated channel auxiliary subunit alpha2delta 3
Gene Aliases: HSA272268
Location: Chr.3:54122594-55074557 on build GRCh38
Assay Gene Location: Within Intron 34

Gene Symbol	Transcript Accession	Protein ID
CACNA2D3	NM_018398.2	NP_060868.2
	XM_005265318.2	XP_005265375.1
	XM_011533946.2	XP_011532248.1
	XM_011533947.2	XP_011532249.1
	XM_011533954.2	XP_011532256.1
	XM_011533955.1	XP_011532257.1
	XM_017006850.1	XP_016862339.1
	XM_017006851.1	XP_016862340.1
	XM_017006853.1	XP_016862342.1
	XM_017006854.1	XP_016862343.1
	AF516696.1	AAN06673.1
	AJ272213.1	CAB75878.1
	AJ272268.1	CAB75962.1
	BC137502.1
	BC137505.1
	BI753834.1

Entrez Gene ID: 57408
Gene Symbol: LRTM1
Gene Name: leucine rich repeats and transmembrane domains 1
Gene Aliases: HT017
Location: Chr.3:54918333-54967088 on build GRCh38
Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Location	Protein ID
LRTM1	NM_001304389.1			NP_001291318.1
LRTM1	BC040732.1			AAH40732.1

Target Copy Number Variation Details

DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv517851	Chr3:54375499 - 55705332 on Build GRCh38	Gain	LRTM1 ERC2-IT1 ESRG CACNA2D3 ERC2 CACNA2D3-AS1 WNT5A

View Full Product Details